C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028843 Trpm7-002 ENSMUSG00000027365 10090 - 2:126791571-126876117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverMuscleOvaryPlacentaENSMUST00000028843
Transcript ID Brain Breast Heart Liver Muscle Ovary Placenta
ENSMUST00000028843 1.774±0.14 1.117±0.00 0.539±0.00 1.238±0.28 1.302±0.46 6.277±2.38 2.396±0.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DY CIL_0002DY_0002 CGP 2:126709096-126876230
CIL_0002DX CIL_0002DX_0002 CGP 2:126791565-126933235

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IDA ruffle
GO:0003779 IDA actin binding
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005262 IDA calcium channel activity
GO:0005524 IEA ATP binding
GO:0005886 IDA plasma membrane
GO:0006468 IDA protein phosphorylation
GO:0006816 IDA calcium ion transport
GO:0010961 IEA cellular magnesium ion homeostasis
GO:0016021 IEA integral component of membrane
GO:0016301 IDA kinase activity
GO:0016340 IDA calcium-dependent cell-matrix adhesion
GO:0017022 IPI myosin binding
GO:0031032 IDA actomyosin structure organization
GO:0046777 IDA protein autophosphorylation
GO:0070588 IDA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313478 TRPM7-001 protein_coding Homo_sapiens 0 7635
ENST00000558444 TRPM7-008 processed_transcript Homo_sapiens 0 351
ENST00000560284 TRPM7-006 retained_intron Homo_sapiens 0 894
ENST00000560516 TRPM7-009 retained_intron Homo_sapiens 0 503
ENST00000560638 TRPM7-004 protein_coding Homo_sapiens 0 2248
ENST00000560849 TRPM7-007 processed_transcript Homo_sapiens 0 219
ENST00000560955 TRPM7-002 protein_coding Homo_sapiens 0 7642
ENST00000561267 TRPM7-010 protein_coding Homo_sapiens 0 802
ENST00000561443 TRPM7-005 processed_transcript Homo_sapiens 0 1219

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