C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoblastoma binding protein 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028915 Rbbp9-001 ENSMUSG00000027428 10090 - 2:144542265-144550869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028915
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028915 16.857±4.12 10.753±1.25 14.899±0.96 10.022±6.03 8.045±1.06 5.749±1.04 3.999±0.44 20.551±3.17 5.887±1.69 12.900±0.93 1.974±0.36 18.715±5.65 7.196±3.69 1.519±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MV CIL_0002MV_0002 CGP 2:144527718-144550869
CIL_0002MU CIL_0002MU_0002 CGP 2:144542265-144590749

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity
GO:0042127 IEA regulation of cell proliferation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337227 RBBP9-001 protein_coding Homo_sapiens 0 791
ENST00000491835 RBBP9-004 processed_transcript Homo_sapiens 0 580
ENST00000493184 RBBP9-003 processed_transcript Homo_sapiens 0 305
ENST00000622282 RBBP9-201 protein_coding Homo_sapiens 0 749

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