C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GINS complex subunit 1 (Psf1 homolog)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028948 Gins1-001 ENSMUSG00000027454 10090 + 2:150909594-150931280 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028948
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028948 0.980±0.30 0.812±0.27 1.497±0.61 5.980±4.50 0.794±0.40 0.888±0.40 0.824±0.15 0.411±0.16 12.140±12.78 0.365±0.12 0.876±0.21 2.157±0.96 7.583±4.98 6.533±2.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002A2 CIL_0002A2_0002 CGP 2:150832493-150931280
CIL_0000XS CIL_0000XS_0002 CGP 2:150905400-151039382

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001833 IMP inner cell mass cell proliferation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006260 IMP DNA replication

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262460 GINS1-001 protein_coding Homo_sapiens 0 728
ENST00000473460 GINS1-004 processed_transcript Homo_sapiens 0 231
ENST00000484893 GINS1-003 processed_transcript Homo_sapiens 0 339

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