C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NSFL1 (p97) cofactor (p47)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027455 Nsfl1c 10090 + 2:151494182-151511414 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028949 Nsfl1c-002 151494293-151511305 protein_coding
  ENSMUST00000089140 Nsfl1c-001 151494182-151511310 protein_coding
  ENSMUST00000103160 Nsfl1c-003 151494304-151511414 protein_coding
  ENSMUST00000125270 Nsfl1c-006 151494290-151501237 retained_intron
  ENSMUST00000133197 Nsfl1c-007 151494311-151503423 retained_intron
  ENSMUST00000134081 Nsfl1c-009 151503737-151509692 retained_intron
  ENSMUST00000139229 Nsfl1c-010 151509100-151511262 retained_intron
  ENSMUST00000146695 Nsfl1c-005 151502980-151510989 retained_intron
  ENSMUST00000153333 Nsfl1c-004 151494189-151507105 retained_intron
  ENSMUST00000156182 Nsfl1c-008 151502327-151509662 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028949ENSMUST00000089140ENSMUST00000103160ENSMUST00000139229ENSMUST00000146695
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028949 12.446±2.14 7.424±2.83 19.483±3.39 21.379±2.42 12.521±4.23 12.573±1.81 11.775±4.47 28.219±1.89 25.595±10.89 13.844±2.27 N/A 15.835±7.05 43.759±19.26 10.965±2.00
ENSMUST00000089140 14.561±1.33 8.841±2.95 20.992±1.03 36.108±0.81 5.717±2.19 5.292±0.95 14.845±3.85 9.295±1.48 7.165±1.66 12.610±1.52 35.337±2.00 10.549±4.17 14.090±4.70 2.986±0.42
ENSMUST00000103160 4.977±0.00 N/A N/A N/A 6.025±1.54 N/A N/A N/A N/A 6.339±0.00 N/A 7.091±0.80 N/A N/A
ENSMUST00000139229 N/A 9.644±1.20 N/A N/A N/A 5.907±0.00 N/A N/A N/A N/A N/A 7.732±0.00 N/A N/A
ENSMUST00000146695 N/A N/A N/A 78.905±0.00 N/A N/A N/A N/A N/A N/A N/A 48.116±26.56 67.469±20.13 16.630±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0008289 IEA lipid binding
GO:0045111 IEA intermediate filament cytoskeleton

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006375 nsfl1c NSFL1 (p97) cofactor (p47) protein_coding Danio_rerio
ENSDARG00000087640 nsfl1c NSFL1 (p97) cofactor (p47) protein_coding Danio_rerio
ENSG00000088833 NSFL1C NSFL1 (p97) cofactor (p47) protein_coding Homo_sapiens

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