C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: NSFL1 (p97) cofactor (p47)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103160 Nsfl1c-003 ENSMUSG00000027455 10090 + 2:151494304-151511414 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastLungOvaryENSMUST00000103160
Transcript ID Adipose Breast Lung Ovary
ENSMUST00000103160 4.977±0.00 6.025±1.54 6.339±0.00 7.091±0.80

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216879 NSFL1C-002 protein_coding Homo_sapiens 0 976
ENST00000353088 NSFL1C-004 protein_coding Homo_sapiens 0 1626
ENST00000381653 NSFL1C-003 nonsense_mediated_decay Homo_sapiens 0 643
ENST00000461211 NSFL1C-006 processed_transcript Homo_sapiens 0 976
ENST00000470376 NSFL1C-001 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000476071 NSFL1C-010 protein_coding Homo_sapiens 0 976
ENST00000478168 NSFL1C-008 retained_intron Homo_sapiens 0 244
ENST00000487086 NSFL1C-009 retained_intron Homo_sapiens 0 381
ENST00000489203 NSFL1C-007 nonsense_mediated_decay Homo_sapiens 0 372
ENST00000519856 RP11-697N18.3-001 processed_pseudogene Homo_sapiens 0 508
ENST00000553571 NSFL1C-013 processed_transcript Homo_sapiens 8e-28 128
ENST00000555359 NSFL1C-011 retained_intron Homo_sapiens 1e-28 130
ENST00000555568 NSFL1C-012 nonsense_mediated_decay Homo_sapiens 0 536
ENST00000555944 NSFL1C-005 nonsense_mediated_decay Homo_sapiens 0 976

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