C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ventricular zone expressed PH domain-containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027831 Veph1 10090 - 3:66053558-66296837 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029419 Veph1-001 66053558-66296837 protein_coding
  ENSMUST00000107837 Veph1-003 66056637-66136438 processed_transcript
  ENSMUST00000182815 Veph1-002 66243998-66296748 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029419ENSMUST00000107837ENSMUST00000182815
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029419 0.076±0.04 0.034±0.02 0.011±0.00 0.664±0.20 0.020±0.00 0.026±0.01 0.034±0.00 3.168±0.99 0.046±0.04 0.301±0.10 0.003±0.00 0.188±0.06 0.095±0.10 0.113±0.03
ENSMUST00000107837 N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A 0.066±0.00 0.191±0.00 0.061±0.00
ENSMUST00000182815 N/A 0.104±0.00 0.015±0.00 N/A N/A N/A N/A N/A 0.027±0.01 N/A N/A 0.207±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081H CIL_00081H_0002 VISTA 3:65626895-66230134
CIL_00028W CIL_00028W_0002 CGP 3:65946151-66296837
CIL_0004JX CIL_0004JX_0003 CGP 3:66053558-66296837

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031095 veph ventricular zone expressed PH domain protein protein_coding Danio_rerio
ENSG00000197415 VEPH1 ventricular zone expressed PH domain-containing 1 protein_coding Homo_sapiens

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