C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3 domain protein D19
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028082 Sh3d19 10090 + 3:85971109-86130526 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000107664 Sh3d19-201 86084434-86130522 protein_coding
  ENSMUST00000182399 Sh3d19-004 86040723-86083571 processed_transcript
  ENSMUST00000182666 Sh3d19-001 86070915-86130526 protein_coding
  ENSMUST00000182723 Sh3d19-003 86038877-86083294 processed_transcript
  ENSMUST00000182969 Sh3d19-002 85971109-86083538 processed_transcript
  ENSMUST00000183119 Sh3d19-005 86040615-86083582 processed_transcript
  ENSMUST00000183202 Sh3d19-006 86125329-86129110 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107664ENSMUST00000182399ENSMUST00000182666ENSMUST00000182969ENSMUST00000183202
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107664 N/A N/A 6.011±0.00 1.019±0.00 N/A N/A N/A N/A 0.717±0.11 N/A 0.271±0.14 3.924±1.38 2.731±0.64 1.133±0.00
ENSMUST00000182399 N/A 3.900±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182666 5.023±2.49 1.416±0.41 19.642±9.06 1.411±0.66 5.169±2.16 9.203±2.66 1.163±0.53 5.880±0.84 4.498±3.07 6.412±0.96 0.367±0.16 4.566±1.22 1.260±0.48 1.189±0.75
ENSMUST00000182969 22.253±0.00 4.195±1.42 N/A N/A 20.694±3.94 42.129±5.77 N/A 21.651±0.03 15.449±2.91 27.090±3.98 N/A 23.414±2.90 N/A 6.125±1.31
ENSMUST00000183202 2.178±0.10 N/A N/A 1.072±0.28 3.079±0.45 N/A N/A N/A 1.279±0.16 N/A 0.166±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079F CIL_00079F_0002 CGP 3:85971109-86130526

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0007010 ISS cytoskeleton organization
GO:0022604 ISS regulation of cell morphogenesis
GO:0051044 IEA positive regulation of membrane protein ectodomain proteolysis
GO:0070064 IEA proline-rich region binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086407 sh3d19 SH3 domain containing 19 protein_coding Danio_rerio
ENSDARG00000088202 sh3d19 SH3 domain containing 19 protein_coding Danio_rerio
ENSG00000109686 SH3D19 SH3 domain containing 19 protein_coding Homo_sapiens

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