C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3 domain protein D19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107664 Sh3d19-201 ENSMUSG00000028082 10090 + 3:86084434-86130522 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000107664
Transcript ID Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000107664 6.011±0.00 1.019±0.00 0.717±0.11 0.271±0.14 3.924±1.38 2.731±0.64 1.133±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079F CIL_00079F_0002 CGP 3:85971109-86130526

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007010 ISS cytoskeleton organization
GO:0022604 ISS regulation of cell morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304527 SH3D19-201 protein_coding Homo_sapiens 0 2736
ENST00000409252 SH3D19-002 protein_coding Homo_sapiens 0 2736
ENST00000409598 SH3D19-001 protein_coding Homo_sapiens 0 1454
ENST00000427414 SH3D19-013 protein_coding Homo_sapiens 0 652
ENST00000462257 SH3D19-005 processed_transcript Homo_sapiens 0 477
ENST00000478503 SH3D19-003 retained_intron Homo_sapiens 0 1454
ENST00000508492 SH3D19-008 retained_intron Homo_sapiens 2e-18 97
ENST00000514152 SH3D19-006 protein_coding Homo_sapiens 0 1454
ENST00000604030 SH3D19-011 processed_transcript Homo_sapiens 1e-32 145

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