C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00079F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109686-ENSG00000109686 CGP 9606 4:151102751-151325632
GeneTranscriptPositionBiotype
ENSG00000145425 (RPS3A)
ribosomal protein S3A 		ENST00000274065 (RPS3A-001) 151099573-151104652 protein_coding
ENST00000503002 (RPS3A-008) 151099631-151101114 protein_coding
ENST00000505243 (RPS3A-005) 151099628-151102932 protein_coding
ENST00000506126 (RPS3A-007) 151099674-151104623 protein_coding
ENST00000507327 (RPS3A-011) 151099669-151104490 protein_coding
ENST00000507485 (RPS3A-002) 151099628-151104205 retained_intron
ENST00000508783 (RPS3A-009) 151099640-151103004 protein_coding
ENST00000509736 (RPS3A-006) 151099624-151104637 protein_coding
ENST00000510993 (RPS3A-010) 151099873-151104528 protein_coding
ENST00000512690 (RPS3A-015) 151099639-151104637 protein_coding
ENST00000512797 (RPS3A-014) 151099668-151104537 protein_coding
ENST00000514682 (RPS3A-004) 151099629-151104637 protein_coding
ENST00000515792 (RPS3A-012) 151099671-151104637 protein_coding
ENST00000515818 (RPS3A-013) 151099629-151104238 nonsense_mediated_decay
ENSG00000189099 (PRSS48)
protease, serine, 48 		ENST00000441586 (PRSS48-002) 151277171-151291453 protein_coding
ENST00000455694 (PRSS48-001) 151277171-151291453 protein_coding
ENSG00000249012 (RP11-731D1.1)
 ENST00000504587 (RP11-731D1.1-001) 151259503-151262849 unprocessed_pseudogene
ENSG00000250350 (RP11-731D1.3)
 ENST00000507181 (RP11-731D1.3-001) 151279030-151279192 unprocessed_pseudogene
ENSG00000252544 (RNU6-1282P)
RNA, U6 small nuclear 1282, pseudogene 		ENST00000516735 (RNU6-1282P-201) 151300518-151300613 snRNA
ENSG00000270681 (RP11-372K14.2)
 ENST00000603472 (RP11-372K14.2-001) 151139991-151141103 antisense
CIL_00079F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028082-ENSMUSG00000028082 CGP 10090 3:85971109-86130526
GeneTranscriptPositionBiotype
ENSMUSG00000028082 (Sh3d19)
SH3 domain protein D19 		ENSMUST00000107664 (Sh3d19-201) 86084434-86130522 protein_coding
ENSMUST00000182399 (Sh3d19-004) 86040723-86083571 processed_transcript
ENSMUST00000182666 (Sh3d19-001) 86070915-86130526 protein_coding
ENSMUST00000182723 (Sh3d19-003) 86038877-86083294 processed_transcript
ENSMUST00000182969 (Sh3d19-002) 85971109-86083538 processed_transcript
ENSMUST00000183119 (Sh3d19-005) 86040615-86083582 processed_transcript
ENSMUST00000183202 (Sh3d19-006) 86125329-86129110 retained_intron
ENSMUSG00000049013 (Prss48)
protease, serine 48 		ENSMUST00000061343 (Prss48-001) 85993810-86002491 protein_coding
ENSMUSG00000065847 (Gm25188)
predicted gene, 25188 		ENSMUST00000083913 (Gm25188-201) 86100534-86100655 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079F_0001ENSG00000145425ENST00000274065ENST00000503002ENST00000505243ENST00000506126ENST00000507327ENST00000507485ENST00000508783ENST00000509736ENST00000510993ENST00000512690ENST00000512797ENST00000514682ENST00000515792ENST00000515818ENSG00000189099ENST00000441586ENST00000455694ENSG00000249012ENST00000504587ENSG00000250350ENST00000507181ENSG00000252544ENST00000516735ENSG00000270681ENST00000603472CIL_00079F_0002ENSMUSG00000028082ENSMUST00000107664ENSMUST00000182399ENSMUST00000182666ENSMUST00000182723ENSMUST00000182969ENSMUST00000183119ENSMUST00000183202ENSMUSG00000049013ENSMUST00000061343ENSMUSG00000065847ENSMUST00000083913
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079F_0001ENSG00000145425ENST00000274065ENST00000509736ENST00000510993ENST00000512690ENSG00000189099ENST00000441586ENST00000455694ENSG00000249012ENST00000504587ENSG00000250350ENST00000507181ENSG00000252544ENST00000516735ENSG00000270681ENST00000603472CIL_00079F_0002ENSMUSG00000028082ENSMUST00000107664ENSMUST00000182399ENSMUST00000182666ENSMUST00000182969ENSMUST00000183202ENSMUSG00000049013ENSMUST00000061343ENSMUSG00000065847ENSMUST00000083913
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145425 ENST00000274065 147.138±0.00 307.123±0.00 53.479±0.00 115.893±57.94 260.354±102.97 336.415±17.21 89.638±6.68 189.662±12.39 189.319±102.57 275.238±23.13 119.076±50.17 548.431±598.32 543.895±346.63 178.578±0.00
ENST00000503002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509736 110.197±0.00 239.433±0.00 N/A 53.884±0.00 147.382±0.00 243.680±0.00 N/A N/A N/A 242.707±0.00 N/A 227.344±21.72 160.098±0.00 136.226±52.92
ENST00000510993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.662±0.00
ENST00000512690 N/A N/A 30.990±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000189099 ENST00000441586 N/A N/A N/A 0.584±0.36 0.016±0.00 1.603±0.00 N/A N/A N/A N/A N/A N/A N/A 0.224±0.00
ENST00000455694 N/A N/A N/A N/A 0.037±0.00 N/A 0.069±0.00 N/A 0.640±0.00 N/A N/A N/A 0.278±0.00 0.475±0.00
ENSG00000249012 ENST00000504587 0.147±0.00 N/A N/A N/A 0.041±0.00 N/A 0.140±0.00 N/A N/A 0.217±0.00 N/A N/A N/A 0.301±0.09
ENSG00000250350 ENST00000507181 0.136±0.00 N/A N/A N/A 0.294±0.00 N/A N/A N/A N/A 5.911±0.00 N/A N/A N/A 0.419±0.00
ENSG00000252544 ENST00000516735 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.357±0.00 N/A N/A N/A N/A
ENSG00000270681 ENST00000603472 0.976±0.00 0.981±0.00 0.253±0.00 1.824±1.55 1.236±0.64 0.547±0.26 0.321±0.07 0.239±0.04 0.633±0.59 1.624±0.76 0.812±0.73 0.611±0.71 0.138±0.13 0.278±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028082 ENSMUST00000107664 N/A N/A 6.011±0.00 1.019±0.00 N/A N/A N/A N/A 0.717±0.11 N/A 0.271±0.14 3.924±1.38 2.731±0.64 1.133±0.00
ENSMUST00000182399 N/A 3.900±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182666 5.023±2.49 1.416±0.41 19.642±9.06 1.411±0.66 5.169±2.16 9.203±2.66 1.163±0.53 5.880±0.84 4.498±3.07 6.412±0.96 0.367±0.16 4.566±1.22 1.260±0.48 1.189±0.75
ENSMUST00000182723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182969 22.253±0.00 4.195±1.42 N/A N/A 20.694±3.94 42.129±5.77 N/A 21.651±0.03 15.449±2.91 27.090±3.98 N/A 23.414±2.90 N/A 6.125±1.31
ENSMUST00000183119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183202 2.178±0.10 N/A N/A 1.072±0.28 3.079±0.45 N/A N/A N/A 1.279±0.16 N/A 0.166±0.00 N/A N/A N/A
ENSMUSG00000049013 ENSMUST00000061343 0.084±0.05 N/A N/A 0.037±0.00 0.070±0.02 0.101±0.04 0.032±0.00 0.079±0.04 0.224±0.09 0.051±0.00 0.034±0.00 0.110±0.04 0.273±0.28 4.883±2.37
ENSMUSG00000065847 ENSMUST00000083913 N/A N/A N/A N/A N/A N/A N/A N/A 13.995±0.00 N/A N/A 9.344±0.00 16.645±0.00 N/A

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