C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3 domain protein D19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182666 Sh3d19-001 ENSMUSG00000028082 10090 + 3:86070915-86130526 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182666 5.023±2.49 1.416±0.41 19.642±9.06 1.411±0.66 5.169±2.16 9.203±2.66 1.163±0.53 5.880±0.84 4.498±3.07 6.412±0.96 0.367±0.16 4.566±1.22 1.260±0.48 1.189±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079F CIL_00079F_0002 CGP 3:85971109-86130526

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0007010 ISS cytoskeleton organization
GO:0022604 ISS regulation of cell morphogenesis
GO:0051044 IEA positive regulation of membrane protein ectodomain proteolysis
GO:0070064 IEA proline-rich region binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304527 SH3D19-201 protein_coding Homo_sapiens 0 3092
ENST00000409252 SH3D19-002 protein_coding Homo_sapiens 0 3177
ENST00000409598 SH3D19-001 protein_coding Homo_sapiens 0 1598
ENST00000427414 SH3D19-013 protein_coding Homo_sapiens 0 652
ENST00000462257 SH3D19-005 processed_transcript Homo_sapiens 0 477
ENST00000474743 SH3D19-004 processed_transcript Homo_sapiens 0.000000000002 77
ENST00000478503 SH3D19-003 retained_intron Homo_sapiens 0 1454
ENST00000508492 SH3D19-008 retained_intron Homo_sapiens 2e-18 97
ENST00000514013 SH3D19-007 processed_transcript Homo_sapiens 0 350
ENST00000514152 SH3D19-006 protein_coding Homo_sapiens 0 1633
ENST00000604030 SH3D19-011 processed_transcript Homo_sapiens 0 586
ENST00000604440 SH3D19-010 processed_transcript Homo_sapiens 0 405

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