C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEP domain containing 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028175 Depdc1a 10090 + 3:159495433-159529955 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029825 Depdc1a-003 159495451-159529576 protein_coding
  ENSMUST00000106041 Depdc1a-002 159495458-159529459 protein_coding
  ENSMUST00000120272 Depdc1a-001 159495433-159529955 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029825ENSMUST00000106041ENSMUST00000120272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029825 0.006±0.00 0.127±0.00 N/A 0.005±0.00 0.072±0.00 0.448±0.09 0.016±0.00 0.017±0.00 N/A N/A 0.045±0.00 0.274±0.15 0.133±0.00 0.038±0.00
ENSMUST00000106041 0.146±0.06 N/A 0.212±0.00 0.382±0.00 0.162±0.13 0.320±0.14 0.051±0.03 N/A 2.428±1.04 0.045±0.02 0.029±0.01 0.489±0.30 1.340±1.15 0.054±0.04
ENSMUST00000120272 0.171±0.10 N/A 0.075±0.00 1.984±0.94 0.162±0.05 0.448±0.08 N/A N/A 7.981±5.20 0.067±0.02 N/A 0.299±0.17 1.166±1.04 0.035±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0017053 ISS transcriptional repressor complex
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0045892 ISS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018165 depdc1a DEP domain containing 1a protein_coding Danio_rerio
ENSG00000024526 DEPDC1 DEP domain containing 1 protein_coding Homo_sapiens

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