C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trimethylguanosine synthase homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028233 Tgs1 10090 + 4:3574875-3616619 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052712 Tgs1-001 3574875-3616619 protein_coding
  ENSMUST00000129964 Tgs1-003 3593586-3598606 processed_transcript
  ENSMUST00000130514 Tgs1-004 3598554-3602551 retained_intron
  ENSMUST00000132518 Tgs1-002 3574950-3583931 retained_intron
  ENSMUST00000146315 Tgs1-005 3605637-3615283 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052712ENSMUST00000146315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052712 2.005±0.60 1.203±0.33 3.830±0.45 9.415±4.90 1.595±0.46 1.023±0.44 0.949±0.20 1.034±0.28 3.975±3.18 2.306±0.76 1.680±0.17 2.432±1.98 6.930±3.15 0.735±0.11
ENSMUST00000146315 N/A N/A N/A 13.042±0.00 N/A N/A N/A N/A N/A N/A N/A 19.842±0.00 21.769±8.71 2.681±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QG CIL_0003QG_0002 CGP 4:3549041-3616619
CIL_00009D CIL_00009D_0002 CGP 4:3574875-3813122

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001510 IEA RNA methylation
GO:0005634 ISA nucleus
GO:0005737 ISA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008168 IEA methyltransferase activity
GO:0009452 IEA 7-methylguanosine RNA capping

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067916 tgs1 trimethylguanosine synthase homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000137574 TGS1 trimethylguanosine synthase 1 protein_coding Homo_sapiens

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