C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028234 Rps20 10090 - 4:3831334-3835665 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000103009 Rps20-002 3834473-3835488 retained_intron
  ENSMUST00000130128 Rps20-003 3834470-3835233 retained_intron
  ENSMUST00000138502 Rps20-001 3831334-3835665 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103009ENSMUST00000138502
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103009 88.950±0.00 N/A 491.425±76.22 136.288±44.77 141.480±51.28 N/A 58.665±23.43 51.906±8.28 351.970±114.07 N/A 305.725±35.29 910.710±322.04 461.415±133.72 148.412±18.43
ENSMUST00000138502 96.378±64.30 196.856±44.89 45.848±0.00 23.872±23.10 95.476±97.39 128.486±40.38 10.358±2.75 33.168±25.10 47.380±50.12 96.733±8.93 7.453±2.90 165.480±96.50 37.668±49.93 65.863±40.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U6 CIL_0001U6_0002 CGP 4:3678115-3835665
CIL_0002RN CIL_0002RN_0002 CGP 4:3831334-3872105

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0006412 IEA translation
GO:0016020 IEA membrane
GO:0022627 IEA cytosolic small ribosomal subunit
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000008988 RPS20 ribosomal protein S20 protein_coding Homo_sapiens

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