C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coronin, actin binding protein 2A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028337 Coro2a 10090 - 4:46536937-46602202 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030021 Coro2a-201 46536937-46566440 protein_coding
  ENSMUST00000107756 Coro2a-001 46536943-46602202 protein_coding
  ENSMUST00000107757 Coro2a-002 46536943-46566458 protein_coding
  ENSMUST00000127304 Coro2a-005 46574922-46601894 processed_transcript
  ENSMUST00000129121 Coro2a-004 46541316-46542802 retained_intron
  ENSMUST00000135062 Coro2a-006 46540541-46542666 processed_transcript
  ENSMUST00000139179 Coro2a-003 46543001-46601891 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030021ENSMUST00000107756ENSMUST00000107757ENSMUST00000139179
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030021 3.999±0.00 2.070±0.00 N/A N/A 8.223±1.24 37.674±0.00 0.668±0.00 N/A N/A 3.420±0.00 N/A 4.546±0.53 N/A 39.114±0.00
ENSMUST00000107756 7.818±0.79 N/A 2.125±0.59 3.731±0.97 9.440±3.13 49.380±8.18 0.727±0.00 1.387±0.36 2.434±0.47 4.271±0.95 0.595±0.00 5.361±2.37 9.987±6.86 N/A
ENSMUST00000107757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.864±12.67
ENSMUST00000139179 N/A 5.929±0.49 N/A N/A 18.958±2.41 71.491±17.06 N/A N/A N/A 8.299±0.00 N/A 9.595±2.10 N/A 27.220±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AQ CIL_0009AQ_0002 VISTA 4:46052102-46653592
CIL_000853 CIL_000853_0002 VISTA 4:46066953-46671362
CIL_0009AR CIL_0009AR_0002 VISTA 4:46066953-46668597
CIL_00029O CIL_00029O_0002 CGP 4:46493781-46602202
CIL_00029Y CIL_00029Y_0002 CGP 4:46536937-46650209

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 ISA actin binding
GO:0015629 IBA actin cytoskeleton
GO:0017053 IBA transcriptional repressor complex
GO:0030036 IBA actin cytoskeleton organization
GO:0051015 IBA actin filament binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005210 coro2a coronin, actin binding protein, 2A protein_coding Danio_rerio
ENSG00000106789 CORO2A coronin, actin binding protein, 2A protein_coding Homo_sapiens

Loading