C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coronin, actin binding protein 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107756 Coro2a-001 ENSMUSG00000028337 10090 - 4:46536943-46602202 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000107756
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000107756 7.818±0.79 2.125±0.59 3.731±0.97 9.440±3.13 49.380±8.18 0.727±0.00 1.387±0.36 2.434±0.47 4.271±0.95 0.595±0.00 5.361±2.37 9.987±6.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AQ CIL_0009AQ_0002 VISTA 4:46052102-46653592
CIL_000853 CIL_000853_0002 VISTA 4:46066953-46671362
CIL_0009AR CIL_0009AR_0002 VISTA 4:46066953-46668597
CIL_00029O CIL_00029O_0002 CGP 4:46493781-46602202
CIL_00029Y CIL_00029Y_0002 CGP 4:46536937-46650209

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISA actin binding
GO:0015629 IBA actin cytoskeleton
GO:0017053 IBA transcriptional repressor complex
GO:0030036 IBA actin cytoskeleton organization
GO:0051015 IBA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343933 CORO2A-001 protein_coding Homo_sapiens 0 1657
ENST00000375077 CORO2A-002 protein_coding Homo_sapiens 0 1738

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