C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coronin, actin binding protein 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139179 Coro2a-003 ENSMUSG00000028337 10090 - 4:46543001-46601891 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungOvaryTestisENSMUST00000139179
Transcript ID Adrenal Breast Colon Lung Ovary Testis
ENSMUST00000139179 5.929±0.49 18.958±2.41 71.491±17.06 8.299±0.00 9.595±2.10 27.220±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AQ CIL_0009AQ_0002 VISTA 4:46052102-46653592
CIL_000853 CIL_000853_0002 VISTA 4:46066953-46671362
CIL_0009AR CIL_0009AR_0002 VISTA 4:46066953-46668597
CIL_00029O CIL_00029O_0002 CGP 4:46493781-46602202
CIL_00029Y CIL_00029Y_0002 CGP 4:46536937-46650209

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343933 CORO2A-001 protein_coding Homo_sapiens 0 1098
ENST00000375077 CORO2A-002 protein_coding Homo_sapiens 0 1175

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