C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coronin, actin binding protein 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030021 Coro2a-201 ENSMUSG00000028337 10090 - 4:46536937-46566440 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLungOvaryTestisENSMUST00000030021
Transcript ID Adipose Adrenal Breast Colon Heart Lung Ovary Testis
ENSMUST00000030021 3.999±0.00 2.070±0.00 8.223±1.24 37.674±0.00 0.668±0.00 3.420±0.00 4.546±0.53 39.114±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AQ CIL_0009AQ_0002 VISTA 4:46052102-46653592
CIL_000853 CIL_000853_0002 VISTA 4:46066953-46671362
CIL_0009AR CIL_0009AR_0002 VISTA 4:46066953-46668597
CIL_00029O CIL_00029O_0002 CGP 4:46493781-46602202
CIL_00029Y CIL_00029Y_0002 CGP 4:46536937-46650209

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISA actin binding
GO:0015629 IBA actin cytoskeleton
GO:0017053 IBA transcriptional repressor complex
GO:0030036 IBA actin cytoskeleton organization
GO:0051015 IBA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343933 CORO2A-001 protein_coding Homo_sapiens 0 1659
ENST00000375077 CORO2A-002 protein_coding Homo_sapiens 0 1659

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