C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bone morphogenic protein/retinoic acid inducible neural specific 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030036 Brinp1-001 ENSMUSG00000028351 10090 - 4:68761514-68954397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030036
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030036 0.114±0.03 0.305±0.06 0.422±0.07 23.773±20.67 0.095±0.05 0.033±0.01 0.068±0.04 0.099±0.04 0.147±0.06 0.575±0.23 0.018±0.00 0.142±0.06 0.096±0.06 0.128±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FN CIL_0004FN_0002 CGP 4:66827584-68954397
CIL_0004FK CIL_0004FK_0002 CGP 4:68761514-70410443

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005737 ISS cytoplasm
GO:0007050 IEA cell cycle arrest
GO:0008219 ISS cell death
GO:0045666 IDA positive regulation of neuron differentiation
GO:0045786 ISS negative regulation of cell cycle
GO:0045930 IDA negative regulation of mitotic cell cycle
GO:0071300 IDA cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265922 BRINP1-001 protein_coding Homo_sapiens 0 3834
ENST00000373964 BRINP1-002 protein_coding Homo_sapiens 0 1881
ENST00000482797 BRINP1-003 processed_transcript Homo_sapiens 0 215

Loading