C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-associated protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028433 Ubap2 10090 - 4:41194313-41275144 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030143 Ubap2-201 41194316-41275135 protein_coding
  ENSMUST00000108068 Ubap2-001 41194313-41275144 protein_coding
  ENSMUST00000132499 Ubap2-003 41221592-41275116 processed_transcript
  ENSMUST00000134782 Ubap2-002 41221589-41251619 protein_coding
  ENSMUST00000135323 Ubap2-006 41206895-41213828 protein_coding
  ENSMUST00000136057 Ubap2-005 41195193-41195765 protein_coding
  ENSMUST00000140662 Ubap2-007 41274066-41275127 processed_transcript
  ENSMUST00000143552 Ubap2-004 41199218-41200077 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030143ENSMUST00000108068ENSMUST00000132499ENSMUST00000134782
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030143 9.507±1.48 17.309±9.10 9.136±2.13 10.573±1.82 9.830±4.08 10.164±2.04 7.415±3.53 8.501±1.30 6.320±4.08 7.987±1.74 18.957±1.71 14.272±3.32 21.633±12.44 44.023±18.39
ENSMUST00000108068 2.009±0.08 N/A N/A 3.077±0.00 N/A N/A 2.695±0.00 N/A 1.923±0.00 N/A 3.481±0.00 3.173±0.00 2.114±0.00 22.648±8.76
ENSMUST00000132499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.827±0.00 84.307±39.12 567.725±0.00
ENSMUST00000134782 N/A N/A N/A 12.946±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AS CIL_0006AS_0002 CGP 4:41135743-41275144
CIL_0006B3 CIL_0006B3_0002 CGP 4:41194313-41314889

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060065 UBAP2 (1 of 2) ubiquitin associated protein 2 protein_coding Danio_rerio
ENSDARG00000088318 ubap2 ubiquitin associated protein 2 protein_coding Danio_rerio
ENSG00000137073 UBAP2 ubiquitin associated protein 2 protein_coding Homo_sapiens

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