C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ciliary neurotrophic factor receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102962 Cntfr-002 ENSMUSG00000028444 10090 - 4:41657498-41697040 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverOvaryPlacentaTestisENSMUST00000102962
Transcript ID Adrenal Colon Liver Ovary Placenta Testis
ENSMUST00000102962 7.318±0.26 0.587±0.45 0.423±0.00 3.178±1.84 0.227±0.16 0.568±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XA CIL_0002XA_0002 CGP 4:41638144-41697089

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001967 IMP suckling behavior
GO:0003360 IMP brainstem development
GO:0004897 IGI ciliary neurotrophic factor receptor activity
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0007548 IMP sex differentiation
GO:0008284 IGI positive regulation of cell proliferation
GO:0031225 IEA anchored component of membrane
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0060538 IMP skeletal muscle organ development
GO:0070120 IGI ciliary neurotrophic factor-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000351266 CNTFR-002 protein_coding Homo_sapiens 0 2237
ENST00000378980 CNTFR-001 protein_coding Homo_sapiens 0 2259
ENST00000417345 CNTFR-003 protein_coding Homo_sapiens 0 1072
ENST00000610543 CNTFR-201 protein_coding Homo_sapiens 0 2255

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