C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: podocan
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028600 Podn 10090 - 4:108014791-108096445 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044248 Podn-201 108014797-108096445 protein_coding
  ENSMUST00000106708 Podn-002 108014851-108031953 protein_coding
  ENSMUST00000106709 Podn-001 108014791-108032090 protein_coding
  ENSMUST00000124265 Podn-005 108027193-108032337 processed_transcript
  ENSMUST00000130026 Podn-007 108017723-108021526 protein_coding
  ENSMUST00000145491 Podn-003 108014854-108031954 processed_transcript
  ENSMUST00000146851 Podn-004 108014793-108024315 protein_coding
  ENSMUST00000147597 Podn-006 108027021-108030986 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044248ENSMUST00000106708ENSMUST00000106709ENSMUST00000130026ENSMUST00000145491ENSMUST00000146851
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044248 N/A 1.597±0.12 N/A N/A N/A 3.113±1.31 N/A 2.614±0.24 0.410±0.22 N/A 1.690±0.83 2.244±0.79 0.319±0.08 0.151±0.00
ENSMUST00000106708 6.827±2.49 2.895±1.55 28.981±1.81 0.384±0.00 4.493±0.45 6.357±2.55 8.116±2.50 3.585±1.09 0.494±0.26 10.322±1.15 1.578±0.80 2.258±0.76 0.533±0.36 0.166±0.10
ENSMUST00000106709 1.555±0.27 1.454±0.09 6.517±0.00 0.261±0.00 2.611±0.08 2.353±0.44 N/A 1.254±0.00 0.308±0.09 2.863±0.17 0.354±0.00 1.469±0.45 0.443±0.00 0.214±0.07
ENSMUST00000130026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.100±0.00 0.496±0.31 2.388±0.00
ENSMUST00000145491 1.843±0.61 2.044±0.52 10.091±1.27 0.252±0.00 2.761±0.00 2.362±0.00 2.600±0.31 1.591±0.17 0.192±0.15 3.174±0.46 0.341±0.11 1.191±0.49 0.164±0.14 0.159±0.08
ENSMUST00000146851 7.013±3.22 3.248±0.00 N/A N/A 8.700±1.32 5.421±0.56 10.099±1.31 4.930±1.12 0.544±0.00 9.440±0.31 N/A 4.021±1.47 0.106±0.00 0.282±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005518 IEA collagen binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0008285 IEA negative regulation of cell proliferation
GO:0030336 ISS negative regulation of cell migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019025 podn podocan protein_coding Danio_rerio
ENSG00000174348 PODN podocan protein_coding Homo_sapiens

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