C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: podocan
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106709 Podn-001 ENSMUSG00000028600 10090 - 4:108014791-108032090 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106709
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106709 1.555±0.27 1.454±0.09 6.517±0.00 0.261±0.00 2.611±0.08 2.353±0.44 1.254±0.00 0.308±0.09 2.863±0.17 0.354±0.00 1.469±0.45 0.443±0.00 0.214±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005518 IEA collagen binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0008285 IEA negative regulation of cell proliferation
GO:0030336 ISS negative regulation of cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312553 PODN-001 protein_coding Homo_sapiens 0 2119
ENST00000371500 PODN-005 protein_coding Homo_sapiens 0 2119
ENST00000395871 PODN-201 protein_coding Homo_sapiens 0 1284
ENST00000425785 SEC63P1-001 processed_pseudogene Homo_sapiens 0.00002 55
ENST00000471285 PODN-003 processed_transcript Homo_sapiens 0 451
ENST00000490650 PODN-004 processed_transcript Homo_sapiens 0 401
ENST00000618387 PODN-202 protein_coding Homo_sapiens 0 2119

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