C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: podocan
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044248 Podn-201 ENSMUSG00000028600 10090 - 4:108014797-108096445 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000044248
Transcript ID Adrenal Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000044248 1.597±0.12 3.113±1.31 2.614±0.24 0.410±0.22 1.690±0.83 2.244±0.79 0.319±0.08 0.151±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0030336 ISS negative regulation of cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312553 PODN-001 protein_coding Homo_sapiens 0 2119
ENST00000371500 PODN-005 protein_coding Homo_sapiens 0 2119
ENST00000395871 PODN-201 protein_coding Homo_sapiens 0 1284
ENST00000425785 SEC63P1-001 processed_pseudogene Homo_sapiens 0.00002 55
ENST00000471285 PODN-003 processed_transcript Homo_sapiens 0 451
ENST00000490650 PODN-004 processed_transcript Homo_sapiens 0 401
ENST00000618387 PODN-202 protein_coding Homo_sapiens 0 2119

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