C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: podocan
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106708 Podn-002 ENSMUSG00000028600 10090 - 4:108014851-108031953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106708
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106708 6.827±2.49 2.895±1.55 28.981±1.81 0.384±0.00 4.493±0.45 6.357±2.55 8.116±2.50 3.585±1.09 0.494±0.26 10.322±1.15 1.578±0.80 2.258±0.76 0.533±0.36 0.166±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0030336 ISS negative regulation of cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312553 PODN-001 protein_coding Homo_sapiens 0 2122
ENST00000371500 PODN-005 protein_coding Homo_sapiens 0 2122
ENST00000395871 PODN-201 protein_coding Homo_sapiens 0 1284
ENST00000425785 SEC63P1-001 processed_pseudogene Homo_sapiens 0.00002 55
ENST00000471285 PODN-003 processed_transcript Homo_sapiens 0 451
ENST00000490650 PODN-004 processed_transcript Homo_sapiens 0 401
ENST00000618387 PODN-202 protein_coding Homo_sapiens 0 2122

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