C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine/arginine-rich splicing factor 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028676 Srsf10 10090 + 4:135855747-135869908 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030438 Srsf10-005 135855878-135868382 processed_transcript
  ENSMUST00000097844 Srsf10-003 135855747-135865815 protein_coding
  ENSMUST00000102544 Srsf10-004 135855747-135868382 protein_coding
  ENSMUST00000105853 Srsf10-001 135855747-135865815 protein_coding
  ENSMUST00000126641 Srsf10-002 135855747-135869908 protein_coding
  ENSMUST00000129198 Srsf10-009 135861820-135863826 processed_transcript
  ENSMUST00000129718 Srsf10-007 135856132-135859231 processed_transcript
  ENSMUST00000142002 Srsf10-010 135863295-135863869 processed_transcript
  ENSMUST00000149878 Srsf10-008 135861788-135863663 processed_transcript
  ENSMUST00000154447 Srsf10-006 135856112-135858801 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030438ENSMUST00000097844ENSMUST00000102544ENSMUST00000105853ENSMUST00000126641ENSMUST00000129718ENSMUST00000154447
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030438 N/A N/A N/A N/A N/A N/A N/A N/A 2.713±0.00 4.561±0.40 N/A 10.510±0.00 N/A 3.335±1.56
ENSMUST00000097844 N/A N/A 2.452±0.00 6.944±1.54 N/A N/A 2.238±0.00 N/A 4.860±1.77 N/A 1.777±0.65 N/A 5.129±0.85 N/A
ENSMUST00000102544 4.234±0.41 N/A 3.904±0.91 N/A 6.152±0.57 N/A 3.814±0.86 2.345±0.28 4.546±2.63 N/A N/A 6.043±1.93 6.699±1.49 5.610±2.37
ENSMUST00000105853 6.099±1.97 N/A 9.066±1.25 15.877±11.32 3.453±0.64 N/A 3.204±0.93 2.224±0.17 10.190±7.95 5.484±1.27 3.326±0.50 12.090±0.94 10.053±4.72 8.389±3.28
ENSMUST00000126641 3.828±1.97 N/A 6.803±0.97 9.064±6.10 3.011±0.98 2.751±0.00 2.188±0.13 2.832±0.65 5.629±4.62 4.404±0.44 1.577±0.43 6.541±1.53 5.942±2.57 3.285±1.43
ENSMUST00000129718 N/A N/A N/A N/A 10.323±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 23.749±0.00
ENSMUST00000154447 45.168±29.73 252.511±18.06 N/A N/A 104.423±69.13 114.605±29.42 9.862±0.37 27.622±10.15 27.623±5.54 82.184±30.58 N/A 212.464±29.50 N/A 48.644±7.83

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000375 IDA RNA splicing, via transesterification reactions
GO:0000398 IEA mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 NAS RNA binding
GO:0005515 IEA protein binding
GO:0005654 IDA nucleoplasm
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0006376 ISS mRNA splice site selection
GO:0006406 NAS mRNA export from nucleus
GO:0016482 IDA cytoplasmic transport
GO:0044822 IEA poly(A) RNA binding
GO:0048025 IDA negative regulation of mRNA splicing, via spliceosome
GO:0051082 NAS unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022415 SRSF10 (1 of 2) serine/arginine-rich splicing factor 10 protein_coding Danio_rerio
ENSDARG00000086411 SRSF10 (2 of 2) serine/arginine-rich splicing factor 10 protein_coding Danio_rerio
ENSG00000188529 SRSF10 serine/arginine-rich splicing factor 10 protein_coding Homo_sapiens

Loading