C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich splicing factor 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102544 Srsf10-004 ENSMUSG00000028676 10090 + 4:135855747-135868382 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000102544
Transcript ID Adipose Bladder Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000102544 4.234±0.41 3.904±0.91 6.152±0.57 3.814±0.86 2.345±0.28 4.546±2.63 6.043±1.93 6.699±1.49 5.610±2.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338597 SRSF10-008 processed_transcript Homo_sapiens 0 442
ENST00000341154 SRSF10-004 processed_transcript Homo_sapiens 0 1471
ENST00000343255 SRSF10-003 protein_coding Homo_sapiens 0 732
ENST00000344989 SRSF10-002 protein_coding Homo_sapiens 0 1808
ENST00000374452 SRSF10-006 protein_coding Homo_sapiens 0 706
ENST00000374453 SRSF10-014 protein_coding Homo_sapiens 0 704
ENST00000400616 RP5-836E8.1-001 processed_pseudogene Homo_sapiens 0 534
ENST00000427601 RP11-600G3.1-001 processed_pseudogene Homo_sapiens 9.94922e-44 178
ENST00000453840 SRSF10-005 protein_coding Homo_sapiens 0 1796
ENST00000473754 SRSF10-016 processed_transcript Homo_sapiens 0 377
ENST00000473858 SRSF10-015 nonsense_mediated_decay Homo_sapiens 0 979
ENST00000484146 SRSF10-017 protein_coding Homo_sapiens 0 726
ENST00000485292 SRSF10-010 processed_transcript Homo_sapiens 0 294
ENST00000485841 SRSF10-007 retained_intron Homo_sapiens 0 427
ENST00000492112 SRSF10-001 protein_coding Homo_sapiens 0 717
ENST00000495785 SRSF10-012 nonsense_mediated_decay Homo_sapiens 0 350

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