C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: stathmin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028832 Stmn1 10090 + 4:134468320-134473843 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030636 Stmn1-001 134468320-134473843 protein_coding
  ENSMUST00000105867 Stmn1-005 134468409-134473664 protein_coding
  ENSMUST00000105868 Stmn1-004 134469742-134473499 protein_coding
  ENSMUST00000127279 Stmn1-003 134468406-134472925 protein_coding
  ENSMUST00000130253 Stmn1-002 134468399-134470683 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030636ENSMUST00000105867ENSMUST00000105868ENSMUST00000127279ENSMUST00000130253
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030636 2.232±0.93 1.214±0.73 37.881±5.20 525.752±142.44 0.681±0.37 2.765±2.01 0.987±0.16 3.620±2.76 36.630±43.28 9.596±5.43 2.029±0.69 27.238±47.89 78.894±23.64 60.758±15.71
ENSMUST00000105867 N/A 0.355±0.14 N/A N/A 0.226±0.10 2.139±1.71 N/A 3.040±1.95 N/A 4.958±1.50 N/A 0.613±0.29 N/A 13.739±0.00
ENSMUST00000105868 N/A 0.172±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127279 N/A 1.405±0.00 N/A N/A N/A N/A N/A N/A 0.173±0.03 N/A N/A N/A N/A N/A
ENSMUST00000130253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.614±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HZ CIL_0008HZ_0002 VISTA 4:134170100-134773977

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005874 IEA microtubule
GO:0007019 IEA microtubule depolymerization
GO:0007052 IEA mitotic spindle organization
GO:0007409 IMP axonogenesis
GO:0007420 IEA brain development
GO:0009615 IEA response to virus
GO:0015631 IEA tubulin binding
GO:0016020 IDA membrane
GO:0031115 IDA negative regulation of microtubule polymerization
GO:0051272 IGI positive regulation of cellular component movement
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004169 stmn1a stathmin 1a protein_coding Danio_rerio
ENSDARG00000033655 stmn1b stathmin 1b protein_coding Danio_rerio
ENSG00000117632 STMN1 stathmin 1 protein_coding Homo_sapiens

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