C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stathmin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127279 Stmn1-003 ENSMUSG00000028832 10090 + 4:134468406-134472925 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverENSMUST00000127279
Transcript ID Adrenal Liver
ENSMUST00000127279 1.405±0.00 0.173±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HZ CIL_0008HZ_0002 VISTA 4:134170100-134773977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0007409 IMP axonogenesis
GO:0016020 IDA membrane
GO:0031115 IDA negative regulation of microtubule polymerization
GO:0051272 IGI positive regulation of cellular component movement

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000041007 stmn1b-001 protein_coding Danio_rerio 0 196
ENST00000220876 STMN2-001 protein_coding Homo_sapiens 3e-36 158
ENST00000357865 STMN1-003 protein_coding Homo_sapiens 0 431
ENST00000374291 STMN1-005 protein_coding Homo_sapiens 0 429
ENST00000399728 STMN1-201 protein_coding Homo_sapiens 0 433
ENST00000426559 STMN1-008 protein_coding Homo_sapiens 0 433
ENST00000446334 STMN1-004 protein_coding Homo_sapiens 0 379
ENST00000455785 STMN1-001 protein_coding Homo_sapiens 0 433
ENST00000465604 STMN1-002 processed_transcript Homo_sapiens 0 324
ENST00000485226 STMN1-007 processed_transcript Homo_sapiens 0 374
ENST00000518111 STMN2-008 protein_coding Homo_sapiens 1e-36 158
ENST00000518491 STMN2-007 protein_coding Homo_sapiens 8e-37 158

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