C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stathmin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105867 Stmn1-005 ENSMUSG00000028832 10090 + 4:134468409-134473664 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLungOvaryTestisENSMUST00000105867
Transcript ID Adrenal Breast Colon Kidney Lung Ovary Testis
ENSMUST00000105867 0.355±0.14 0.226±0.10 2.139±1.71 3.040±1.95 4.958±1.50 0.613±0.29 13.739±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HZ CIL_0008HZ_0002 VISTA 4:134170100-134773977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0007409 IMP axonogenesis
GO:0016020 IDA membrane
GO:0031115 IDA negative regulation of microtubule polymerization
GO:0051272 IGI positive regulation of cellular component movement

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000041007 stmn1b-001 protein_coding Danio_rerio 0 224
ENST00000220876 STMN2-001 protein_coding Homo_sapiens 2e-38 165
ENST00000357865 STMN1-003 protein_coding Homo_sapiens 0 841
ENST00000374291 STMN1-005 protein_coding Homo_sapiens 0 839
ENST00000399728 STMN1-201 protein_coding Homo_sapiens 0 845
ENST00000426559 STMN1-008 protein_coding Homo_sapiens 0 540
ENST00000446334 STMN1-004 protein_coding Homo_sapiens 0 383
ENST00000455785 STMN1-001 protein_coding Homo_sapiens 0 870
ENST00000465604 STMN1-002 processed_transcript Homo_sapiens 0 523
ENST00000485226 STMN1-007 processed_transcript Homo_sapiens 0 453
ENST00000518111 STMN2-008 protein_coding Homo_sapiens 6e-39 165
ENST00000518491 STMN2-007 protein_coding Homo_sapiens 5e-39 165

Loading