C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, U
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028909 Ptpru 10090 - 4:131768457-131838288 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030741 Ptpru-003 131769498-131838231 protein_coding
  ENSMUST00000097860 Ptpru-004 131783228-131821516 protein_coding
  ENSMUST00000105987 Ptpru-001 131768457-131838288 protein_coding
  ENSMUST00000123878 Ptpru-005 131788532-131802996 processed_transcript
  ENSMUST00000127633 Ptpru-002 131772136-131838252 processed_transcript
  ENSMUST00000139641 Ptpru-008 131799740-131803620 retained_intron
  ENSMUST00000144136 Ptpru-007 131768458-131768921 processed_transcript
  ENSMUST00000154224 Ptpru-006 131793599-131798370 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030741ENSMUST00000097860ENSMUST00000105987ENSMUST00000127633
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030741 N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A 0.046±0.02 2.542±0.00 N/A N/A
ENSMUST00000097860 N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000105987 5.533±3.51 17.261±0.51 14.984±2.44 3.004±1.01 2.512±0.63 5.718±1.12 0.719±0.34 6.944±1.12 0.676±0.62 12.542±3.18 0.118±0.04 4.109±1.66 4.961±4.05 0.423±0.12
ENSMUST00000127633 N/A 4.148±0.50 N/A N/A 0.504±0.00 0.896±0.00 0.170±0.00 N/A 0.060±0.00 3.507±0.00 N/A 0.971±0.16 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005886 IEA plasma membrane
GO:0005911 IEA cell-cell junction
GO:0008013 IPI beta-catenin binding
GO:0008285 IEA negative regulation of cell proliferation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016337 IEA single organismal cell-cell adhesion
GO:0030154 IEA cell differentiation
GO:0030336 IEA negative regulation of cell migration
GO:0031100 IEA organ regeneration
GO:0034109 IDA homotypic cell-cell adhesion
GO:0034394 IEA protein localization to cell surface
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0051384 IEA response to glucocorticoid
GO:0060070 IEA canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078090 ptprub protein tyrosine phosphatase, receptor type, U, b protein_coding Danio_rerio
ENSDARG00000092638 ptprua protein tyrosine phosphatase, receptor type, U, a protein_coding Danio_rerio
ENSDARG00000094911 PTPRU (3 of 3) protein tyrosine phosphatase, receptor type, U protein_coding Danio_rerio
ENSG00000060656 PTPRU protein tyrosine phosphatase, receptor type, U protein_coding Homo_sapiens

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