C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) 26S subunit, ATPase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028932 Psmc2 10090 + 5:21785283-21803787 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030769 Psmc2-001 21785283-21803787 protein_coding
  ENSMUST00000132720 Psmc2-002 21794103-21798185 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030769
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030769 21.417±1.72 5.863±2.54 43.107±5.25 33.372±12.16 12.590±4.10 11.774±1.79 21.714±0.96 21.168±5.37 32.887±15.81 14.752±4.41 53.361±1.04 22.775±20.10 57.013±16.30 109.546±3.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0002 VISTA 5:21195900-21797355
CIL_0005C8 CIL_0005C8_0002 CGP 5:21757267-21803787
CIL_0001RC CIL_0001RC_0003 CGP 5:21785283-21865604

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0000932 IDA cytoplasmic mRNA processing body
GO:0001649 IEA osteoblast differentiation
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016020 IEA membrane
GO:0016887 IEA ATPase activity
GO:0022624 IDA proteasome accessory complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020101 psmc2 proteasome (prosome, macropain) 26S subunit, ATPase 2 protein_coding Danio_rerio
ENSG00000161057 PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2 protein_coding Homo_sapiens

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