C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pantothenate kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105632 Pank4-004 ENSMUSG00000029056 10090 + 4:154974533-154980938 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000105632
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000105632 10.690±0.20 6.238±2.30 6.715±0.00 11.343±3.30 11.765±3.06 7.008±1.79 7.172±0.62 5.744±1.40 6.304±3.91 9.292±3.23 19.667±7.23 1.335±0.00 2.227±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XZ CIL_0007XZ_0002 VISTA 4:154471105-155072345
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378466 PANK4-001 protein_coding Homo_sapiens 0 1127
ENST00000435556 PANK4-008 protein_coding Homo_sapiens 0 1127
ENST00000468002 PANK4-004 nonsense_mediated_decay Homo_sapiens 0 196
ENST00000471361 PANK4-003 retained_intron Homo_sapiens 0 411
ENST00000502512 PANK4-012 nonsense_mediated_decay Homo_sapiens 0 283
ENST00000505228 PANK4-009 nonsense_mediated_decay Homo_sapiens 0 593
ENST00000515423 PANK4-011 retained_intron Homo_sapiens 0 252
ENST00000615291 PANK4-201 protein_coding Homo_sapiens 0 1127

Loading