C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pantothenate kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148934 Pank4-003 ENSMUSG00000029056 10090 + 4:154969999-154980889 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000148934
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000148934 4.581±0.25 2.938±0.00 5.710±0.82 5.818±0.12 3.397±1.05 4.483±0.13 3.051±0.52 6.737±0.49 4.294±0.86 4.502±0.07 5.387±1.40 2.282±0.49 1.870±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XZ CIL_0007XZ_0002 VISTA 4:154471105-155072345
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378466 PANK4-001 protein_coding Homo_sapiens 0 1384
ENST00000435556 PANK4-008 protein_coding Homo_sapiens 0 1304
ENST00000468002 PANK4-004 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000471361 PANK4-003 retained_intron Homo_sapiens 2e-29 134
ENST00000502512 PANK4-012 nonsense_mediated_decay Homo_sapiens 0 623
ENST00000505228 PANK4-009 nonsense_mediated_decay Homo_sapiens 0 1855
ENST00000515423 PANK4-011 retained_intron Homo_sapiens 0 244
ENST00000615291 PANK4-201 protein_coding Homo_sapiens 0 1384

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