C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pantothenate kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030931 Pank4-001 ENSMUSG00000029056 10090 + 4:154964123-154980871 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030931
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030931 7.724±0.78 12.262±4.43 10.637±0.16 9.738±4.21 8.109±3.79 8.307±2.05 12.937±2.28 7.296±1.55 7.267±3.76 7.614±2.45 9.308±1.65 12.545±4.62 4.284±2.95 2.620±1.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XZ CIL_0007XZ_0002 VISTA 4:154471105-155072345
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004594 IEA pantothenate kinase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0015937 IEA coenzyme A biosynthetic process
GO:0016310 IEA phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378466 PANK4-001 protein_coding Homo_sapiens 0 2447
ENST00000435556 PANK4-008 protein_coding Homo_sapiens 0 1838
ENST00000468002 PANK4-004 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000471361 PANK4-003 retained_intron Homo_sapiens 0 411
ENST00000486396 PANK4-005 nonsense_mediated_decay Homo_sapiens 7.00649e-44 182
ENST00000502512 PANK4-012 nonsense_mediated_decay Homo_sapiens 0 283
ENST00000502770 PANK4-007 nonsense_mediated_decay Homo_sapiens 0 215
ENST00000505228 PANK4-009 nonsense_mediated_decay Homo_sapiens 0 1384
ENST00000514922 PANK4-010 retained_intron Homo_sapiens 0 287
ENST00000515423 PANK4-011 retained_intron Homo_sapiens 0 244
ENST00000615291 PANK4-201 protein_coding Homo_sapiens 0 2440

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