C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4 (anion exchanger), member 1, adaptor protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117262 Slc4a1ap-002 ENSMUSG00000029141 10090 + 5:31527012-31554042 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000117262
Transcript ID Adipose Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000117262 1.751±0.00 2.946±0.32 7.799±4.46 2.555±0.00 1.352±0.01 2.587±0.88 2.019±0.27 6.780±4.63 7.265±4.47 6.596±7.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013M CIL_00013M_0002 CGP 5:31494741-31527807
CIL_0003JM CIL_0003JM_0003 CGP 5:31514569-31554042
CIL_00013J CIL_00013J_0002 CGP 5:31526995-31701972

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326019 SLC4A1AP-001 protein_coding Homo_sapiens 0 2036
ENST00000419995 SLC4A1APP1-001 processed_pseudogene Homo_sapiens 0 459
ENST00000427424 SLC4A1AP-003 nonsense_mediated_decay Homo_sapiens 0 501
ENST00000492196 SLC4A1AP-002 retained_intron Homo_sapiens 0 257
ENST00000613058 SLC4A1AP-201 protein_coding Homo_sapiens 0 2036
ENST00000613517 SLC4A1AP-004 protein_coding Homo_sapiens 0 813
ENST00000618046 SLC4A1AP-005 protein_coding Homo_sapiens 0 2036

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