C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031034 Nrbp1-001 ENSMUSG00000029148 10090 + 5:31240864-31251566 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031034
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031034 53.879±7.46 42.896±2.30 45.364±5.75 31.744±3.64 40.715±8.75 40.103±4.24 39.550±3.75 31.569±1.52 26.152±2.59 43.131±1.60 19.580±2.64 54.009±14.58 45.655±18.11 18.609±7.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012H CIL_00012H_0002 CGP 5:31240864-31253202

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 ISO protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0006468 IEA protein phosphorylation
GO:0006888 ISS ER to Golgi vesicle-mediated transport
GO:0012505 ISO endomembrane system
GO:0016020 IEA membrane
GO:0042802 IPI identical protein binding
GO:0042803 IDA protein homodimerization activity
GO:0042995 IEA cell projection
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000041146 nrbp2-201 protein_coding Danio_rerio 0 387
ENSDART00000135293 nrbp2-001 protein_coding Danio_rerio 0 385
ENSDART00000141456 nrbp2-002 processed_transcript Danio_rerio 0 222
ENST00000233557 NRBP1-001 protein_coding Homo_sapiens 0 3057
ENST00000356442 NRBP1-007 protein_coding Homo_sapiens 0 392
ENST00000379852 NRBP1-002 protein_coding Homo_sapiens 0 2996
ENST00000379863 NRBP1-003 protein_coding Homo_sapiens 0 2850
ENST00000419281 NRBP1-006 protein_coding Homo_sapiens 0 726
ENST00000460499 NRBP1-004 retained_intron Homo_sapiens 0 1810
ENST00000486701 NRBP1-010 retained_intron Homo_sapiens 0 457
ENST00000493746 NRBP1-008 retained_intron Homo_sapiens 0 353
ENST00000493768 NRBP1-009 retained_intron Homo_sapiens 0 250

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