C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139602 Nrbp1-006 ENSMUSG00000029148 10090 + 5:31240932-31247914 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000139602
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000139602 21.526±0.00 24.736±0.00 30.609±0.65 14.665±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012H CIL_00012H_0002 CGP 5:31240864-31253202

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000041146 nrbp2-201 protein_coding Danio_rerio 0 387
ENSDART00000135293 nrbp2-001 protein_coding Danio_rerio 0 385
ENSDART00000141456 nrbp2-002 processed_transcript Danio_rerio 0 222
ENST00000233557 NRBP1-001 protein_coding Homo_sapiens 0 1098
ENST00000356442 NRBP1-007 protein_coding Homo_sapiens 0 200
ENST00000379852 NRBP1-002 protein_coding Homo_sapiens 0 1098
ENST00000379863 NRBP1-003 protein_coding Homo_sapiens 0 987
ENST00000419281 NRBP1-006 protein_coding Homo_sapiens 0 534
ENST00000460499 NRBP1-004 retained_intron Homo_sapiens 0 254
ENST00000493746 NRBP1-008 retained_intron Homo_sapiens 0 353
ENST00000493768 NRBP1-009 retained_intron Homo_sapiens 0 250

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