C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphoribosyl pyrophosphate amidotransferase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029246 Ppat 10090 - 5:76913249-76951578 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031158 Ppat-003 76915044-76951165 retained_intron
  ENSMUST00000140076 Ppat-001 76913276-76951578 protein_coding
  ENSMUST00000155272 Ppat-002 76913249-76951572 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031158ENSMUST00000140076
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031158 N/A N/A 9.373±0.00 N/A N/A N/A N/A N/A N/A N/A 18.076±0.00 16.672±11.41 4.674±0.00
ENSMUST00000140076 4.819±0.10 4.428±0.25 3.740±0.68 3.370±0.49 3.130±0.70 3.567±0.15 8.493±1.02 13.174±3.73 3.894±0.37 5.891±0.72 7.568±1.44 7.487±3.64 2.398±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Q CIL_00084Q_0002 VISTA 5:76362343-76966797
CIL_0008G9 CIL_0008G9_0002 VISTA 5:76829880-77430993
CIL_00025Q CIL_00025Q_0002 CGP 5:76873659-76951578
CIL_0001WN CIL_0001WN_0002 CGP 5:76913249-76967509

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 IEA G1/S transition of mitotic cell cycle
GO:0001822 IEA kidney development
GO:0004044 IEA amidophosphoribosyltransferase activity
GO:0006189 IEA 'de novo' IMP biosynthetic process
GO:0006543 IEA glutamine catabolic process
GO:0007595 IEA lactation
GO:0009113 IEA purine nucleobase biosynthetic process
GO:0009116 IEA nucleoside metabolic process
GO:0009168 IEA purine ribonucleoside monophosphate biosynthetic process
GO:0019693 IEA ribose phosphate metabolic process
GO:0031100 IEA organ regeneration
GO:0032869 IEA cellular response to insulin stimulus
GO:0035690 IEA cellular response to drug
GO:0042493 IEA response to drug
GO:0046872 IEA metal ion binding
GO:0051289 IEA protein homotetramerization
GO:0051536 IEA iron-sulfur cluster binding
GO:0060135 IEA maternal process involved in female pregnancy

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004517 ppat phosphoribosyl pyrophosphate amidotransferase protein_coding Danio_rerio
ENSG00000128059 PPAT phosphoribosyl pyrophosphate amidotransferase protein_coding Homo_sapiens

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