C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001WN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128059-ENSG00000128050 CGP 9606 4:56393362-56461368
GeneTranscriptPositionBiotype
ENSG00000128050 (PAICS)
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase 		ENST00000264221 (PAICS-201) 56435749-56461368 protein_coding
ENST00000399688 (PAICS-003) 56436138-56461361 protein_coding
ENST00000504188 (PAICS-009) 56436039-56441863 retained_intron
ENST00000505164 (PAICS-001) 56435752-56459499 protein_coding
ENST00000508554 (PAICS-010) 56448699-56451191 retained_intron
ENST00000510584 (PAICS-008) 56436138-56442028 retained_intron
ENST00000512576 (PAICS-006) 56436152-56459664 protein_coding
ENST00000514888 (PAICS-002) 56435741-56461361 protein_coding
ENSG00000128059 (PPAT)
phosphoribosyl pyrophosphate amidotransferase 		ENST00000264220 (PPAT-001) 56393362-56435615 protein_coding
ENST00000425339 (PPAT-002) 56393365-56400916 retained_intron
ENST00000507648 (PPAT-003) 56401390-56408328 processed_transcript
ENST00000507724 (PPAT-004) 56403074-56435496 nonsense_mediated_decay
ENST00000510643 (PPAT-005) 56403063-56435508 nonsense_mediated_decay
CIL_0001WN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029246-ENSMUSG00000029247 CGP 10090 5:76913249-76967509
GeneTranscriptPositionBiotype
ENSMUSG00000029246 (Ppat)
phosphoribosyl pyrophosphate amidotransferase 		ENSMUST00000031158 (Ppat-003) 76915044-76951165 retained_intron
ENSMUST00000140076 (Ppat-001) 76913276-76951578 protein_coding
ENSMUST00000155272 (Ppat-002) 76913249-76951572 nonsense_mediated_decay
ENSMUSG00000029247 (Paics)
phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase 		ENSMUST00000031160 (Paics-003) 76951307-76967505 protein_coding
ENSMUST00000117536 (Paics-002) 76951368-76967313 protein_coding
ENSMUST00000120912 (Paics-001) 76951348-76967509 protein_coding
ENSMUST00000140051 (Paics-006) 76961476-76962970 retained_intron
ENSMUST00000141687 (Paics-004) 76951382-76959350 protein_coding
ENSMUST00000153648 (Paics-005) 76951777-76962479 nonsense_mediated_decay
ENSMUST00000154688 (Paics-007) 76966157-76966841 retained_intron
ENSMUSG00000072852 (2310040G07Rik)
RIKEN cDNA 2310040G07 gene 		ENSMUST00000101090 (2310040G07Rik-201) 76928368-76928845 antisense
ENSMUST00000145897 (2310040G07Rik-001) 76928608-76947758 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WN_0001ENSG00000128050ENST00000264221ENST00000399688ENST00000504188ENST00000505164ENST00000508554ENST00000510584ENST00000512576ENST00000514888ENSG00000128059ENST00000264220ENST00000425339ENST00000507648ENST00000507724ENST00000510643CIL_0001WN_0002ENSMUSG00000029246ENSMUST00000031158ENSMUST00000140076ENSMUST00000155272ENSMUSG00000029247ENSMUST00000031160ENSMUST00000117536ENSMUST00000120912ENSMUST00000140051ENSMUST00000141687ENSMUST00000153648ENSMUST00000154688ENSMUSG00000072852ENSMUST00000101090ENSMUST00000145897
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WN_0001ENSG00000128050ENST00000264221ENST00000399688ENST00000505164ENST00000512576ENST00000514888ENSG00000128059ENST00000264220ENST00000425339ENST00000507648ENST00000507724CIL_0001WN_0002ENSMUSG00000029246ENSMUST00000031158ENSMUST00000140076ENSMUSG00000029247ENSMUST00000031160ENSMUST00000117536ENSMUST00000120912ENSMUST00000154688ENSMUSG00000072852ENSMUST00000101090ENSMUST00000145897
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128050 ENST00000264221 1.408±0.00 N/A 1.849±0.00 6.054±0.00 N/A 4.734±0.00 0.225±0.00 N/A 6.449±6.07 N/A N/A 6.356±0.94 8.934±3.66 3.159±0.00
ENST00000399688 4.026±0.00 6.138±0.00 N/A 6.675±0.00 6.203±0.00 3.156±0.00 1.818±0.00 9.978±0.00 5.290±0.00 N/A N/A 11.433±8.45 5.228±2.22 10.832±1.64
ENST00000504188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505164 N/A N/A N/A N/A N/A N/A N/A N/A 1.839±0.00 N/A N/A 22.913±0.00 17.159±0.00 10.117±0.00
ENST00000508554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512576 3.296±0.00 N/A N/A N/A 2.958±0.16 4.814±0.28 0.967±0.00 N/A N/A 1.971±0.00 2.181±0.48 6.714±1.39 N/A 3.663±0.00
ENST00000514888 N/A N/A 1.730±0.00 5.741±0.00 N/A 5.417±0.00 2.873±0.00 6.476±0.00 0.383±0.00 N/A N/A 8.033±5.63 4.962±0.22 N/A
ENSG00000128059 ENST00000264220 0.818±0.00 2.339±0.00 N/A 2.314±0.50 1.084±0.06 0.965±0.11 0.416±0.29 0.807±0.10 1.218±0.08 0.942±0.00 0.553±0.13 2.478±1.08 1.854±0.18 2.914±0.16
ENST00000425339 N/A N/A N/A N/A 0.728±0.00 N/A N/A N/A N/A 0.133±0.00 N/A 0.336±0.00 N/A N/A
ENST00000507648 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.521±0.00 N/A N/A N/A N/A
ENST00000507724 N/A N/A N/A N/A N/A N/A 0.954±0.00 5.055±0.00 2.906±0.00 N/A N/A N/A N/A N/A
ENST00000510643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029246 ENSMUST00000031158 N/A N/A N/A 9.373±0.00 N/A N/A N/A N/A N/A N/A N/A 18.076±0.00 16.672±11.41 4.674±0.00
ENSMUST00000140076 4.819±0.10 N/A 4.428±0.25 3.740±0.68 3.370±0.49 3.130±0.70 3.567±0.15 8.493±1.02 13.174±3.73 3.894±0.37 5.891±0.72 7.568±1.44 7.487±3.64 2.398±0.26
ENSMUST00000155272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029247 ENSMUST00000031160 11.481±2.13 16.408±2.41 11.643±2.44 13.154±4.09 7.037±2.12 5.342±0.68 10.241±2.76 8.347±0.00 14.522±5.30 4.115±0.44 13.387±2.19 7.300±1.02 12.311±4.04 3.966±0.33
ENSMUST00000117536 14.425±6.69 14.310±0.43 13.847±2.31 19.148±12.99 13.907±2.04 11.724±4.02 16.442±2.12 46.643±4.77 44.214±25.60 18.363±2.75 11.661±1.51 26.664±17.79 33.207±16.44 12.525±8.48
ENSMUST00000120912 8.069±0.62 N/A 17.340±0.46 12.212±2.79 5.062±0.00 N/A 32.006±0.00 N/A 34.471±6.96 12.912±0.00 9.023±2.97 29.045±9.94 20.656±9.35 7.291±1.58
ENSMUST00000140051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154688 N/A 41.141±5.75 N/A N/A N/A 17.322±2.02 N/A N/A N/A N/A N/A 31.314±4.97 N/A N/A
ENSMUSG00000072852 ENSMUST00000101090 1.520±0.33 1.124±0.58 0.716±0.17 0.668±0.50 0.735±0.21 0.566±0.50 3.121±0.77 2.149±0.35 0.344±0.13 1.893±0.36 1.651±0.48 3.427±1.66 0.193±0.09 0.247±0.05
ENSMUST00000145897 0.453±0.27 0.237±0.00 N/A 0.064±0.00 0.561±0.00 0.576±0.00 N/A N/A 0.075±0.02 N/A N/A 1.173±0.41 0.164±0.12 N/A

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