C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00035Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109272-ENSG00000163739 CGP 9606 4:73853189-73871242
GeneTranscriptPositionBiotype
ENSG00000109272 (PF4V1)
platelet factor 4 variant 1 		ENST00000226524 (PF4V1-001) 73853189-73854155 protein_coding
ENSG00000163739 (CXCL1)
chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 		ENST00000395761 (CXCL1-001) 73869404-73871242 protein_coding
ENST00000509101 (CXCL1-002) 73869393-73870177 processed_transcript
CIL_00035Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029373-ENSMUSG00000029379 CGP 10090 5:90772435-90788086
GeneTranscriptPositionBiotype
ENSMUSG00000029373 (Pf4)
platelet factor 4 		ENSMUST00000031320 (Pf4-201) 90772435-90773381 protein_coding
ENSMUSG00000029379 (Cxcl3)
chemokine (C-X-C motif) ligand 3 		ENSMUST00000031326 (Cxcl3-201) 90786103-90788086 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00035Y_0001ENSG00000109272ENST00000226524ENSG00000163739ENST00000395761ENST00000509101CIL_00035Y_0002ENSMUSG00000029373ENSMUST00000031320ENSMUSG00000029379ENSMUST00000031326
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00035Y_0001ENSG00000109272ENST00000226524ENSG00000163739ENST00000395761ENST00000509101CIL_00035Y_0002ENSMUSG00000029373ENSMUST00000031320ENSMUSG00000029379ENSMUST00000031326
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109272 ENST00000226524 N/A N/A N/A N/A 0.914±0.00 N/A 0.044±0.00 0.250±0.00 N/A 0.533±0.00 N/A N/A 0.269±0.20 0.088±0.00
ENSG00000163739 ENST00000395761 0.922±0.00 1.457±0.00 N/A 0.866±0.43 1.363±1.00 1.242±0.38 0.314±0.27 3.232±0.00 1.652±0.17 17.854±15.55 0.117±0.00 19.837±15.11 2.428±1.74 0.182±0.15
ENST00000509101 N/A N/A N/A N/A N/A N/A 0.521±0.00 0.383±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029373 ENSMUST00000031320 29.292±2.56 6.788±2.17 38.199±6.90 5.379±3.47 39.022±12.33 20.566±4.42 24.297±6.63 3.139±0.80 115.989±120.01 23.936±2.01 4.538±1.04 8.323±2.64 20.552±15.08 1.776±0.98
ENSMUSG00000029379 ENSMUST00000031326 0.109±0.05 0.125±0.08 0.034±0.00 0.025±0.01 N/A 0.156±0.07 N/A 0.061±0.02 0.025±0.02 0.742±0.21 N/A 0.336±0.21 0.215±0.11 0.066±0.00

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