C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 4-hydroxyphenylpyruvic acid dioxygenase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029445 Hpd 10090 - 5:123171807-123182725 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031398 Hpd-001 123171807-123182725 protein_coding
  ENSMUST00000124110 Hpd-004 123180659-123182067 processed_transcript
  ENSMUST00000144679 Hpd-005 123172101-123175915 protein_coding
  ENSMUST00000154713 Hpd-002 123177529-123182723 protein_coding
  ENSMUST00000155092 Hpd-006 123171872-123172911 processed_transcript
  ENSMUST00000156539 Hpd-003 123177529-123182722 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031398ENSMUST00000124110ENSMUST00000144679ENSMUST00000154713ENSMUST00000155092ENSMUST00000156539
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031398 0.401±0.20 0.173±0.11 0.066±0.03 2.093±1.87 42.328±3.21 0.237±0.15 144.618±2.78 977.286±885.18 0.481±0.12 0.112±0.07 0.786±0.64 0.705±0.18 0.175±0.02
ENSMUST00000124110 N/A 0.601±0.16 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.317±0.00 N/A
ENSMUST00000144679 N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A 0.522±0.00 N/A 1.185±0.99 0.673±0.00 N/A
ENSMUST00000154713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.137±0.00 0.096±0.00
ENSMUST00000155092 0.182±0.00 0.355±0.24 N/A N/A N/A 0.062±0.01 N/A N/A 0.295±0.00 N/A 0.826±0.20 0.389±0.00 0.859±0.08
ENSMUST00000156539 N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZI CIL_0002ZI_0002 CGP 5:123142193-123182725
CIL_0002ZH CIL_0002ZH_0002 CGP 5:123171807-123250131

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003868 ISS 4-hydroxyphenylpyruvate dioxygenase activity
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0006559 IEA L-phenylalanine catabolic process
GO:0006572 ISS tyrosine catabolic process
GO:0009072 IEA aromatic amino acid family metabolic process
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044935 hpdb 4-hydroxyphenylpyruvate dioxygenase b protein_coding Danio_rerio
ENSG00000158104 HPD 4-hydroxyphenylpyruvate dioxygenase protein_coding Homo_sapiens

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