C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 4-hydroxyphenylpyruvic acid dioxygenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031398 Hpd-001 ENSMUSG00000029445 10090 - 5:123171807-123182725 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031398
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031398 0.401±0.20 0.173±0.11 0.066±0.03 2.093±1.87 42.328±3.21 0.237±0.15 144.618±2.78 977.286±885.18 0.481±0.12 0.112±0.07 0.786±0.64 0.705±0.18 0.175±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZI CIL_0002ZI_0002 CGP 5:123142193-123182725
CIL_0002ZH CIL_0002ZH_0002 CGP 5:123171807-123250131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003868 ISS 4-hydroxyphenylpyruvate dioxygenase activity
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0006559 IEA L-phenylalanine catabolic process
GO:0006572 ISS tyrosine catabolic process
GO:0009072 IEA aromatic amino acid family metabolic process
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289004 HPD-002 protein_coding Homo_sapiens 0 1290
ENST00000542159 HPD-004 retained_intron Homo_sapiens 0 272
ENST00000543163 HPD-001 protein_coding Homo_sapiens 0 1279
ENST00000543869 HPD-005 processed_transcript Homo_sapiens 0 228

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