C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 30
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029592 Usp30 10090 + 5:114100333-114123506 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031588 Usp30-001 114100333-114123506 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031588
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031588 9.224±0.77 18.505±1.24 5.967±2.70 11.058±3.28 8.898±1.64 7.868±0.74 3.793±0.61 10.699±0.96 5.010±2.07 8.904±0.28 2.088±0.46 12.927±3.74 6.068±1.90 7.447±4.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VR CIL_0001VR_0002 CGP 5:114026910-114123506
CIL_0001VU CIL_0001VU_0002 CGP 5:114100333-114128218

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000422 ISS mitochondrion degradation
GO:0004197 ISS cysteine-type endopeptidase activity
GO:0004221 IMP ubiquitin thiolesterase activity
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005741 ISS mitochondrial outer membrane
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008053 IMP mitochondrial fusion
GO:0016021 IEA integral component of membrane
GO:0016579 IMP protein deubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056842 usp30 ubiquitin specific peptidase 30 protein_coding Danio_rerio
ENSDARG00000086976 USP30 (2 of 3) ubiquitin specific peptidase 30 protein_coding Danio_rerio
ENSDARG00000088037 USP30 (3 of 3) ubiquitin specific peptidase 30 protein_coding Danio_rerio
ENSG00000135093 USP30 ubiquitin specific peptidase 30 protein_coding Homo_sapiens

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