C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LUC7-like 2 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029823 Luc7l2 10090 + 6:38551334-38609470 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057692 Luc7l2-001 38551465-38609470 protein_coding
  ENSMUST00000159936 Luc7l2-010 38555723-38589286 nonsense_mediated_decay
  ENSMUST00000160430 Luc7l2-012 38570102-38606026 protein_coding
  ENSMUST00000160511 Luc7l2-007 38557641-38608939 nonsense_mediated_decay
  ENSMUST00000160582 Luc7l2-006 38551843-38585106 processed_transcript
  ENSMUST00000160922 Luc7l2-008 38551531-38558049 retained_intron
  ENSMUST00000161227 Luc7l2-002 38551803-38609427 protein_coding
  ENSMUST00000161538 Luc7l2-003 38551465-38606367 protein_coding
  ENSMUST00000162386 Luc7l2-005 38551514-38609468 nonsense_mediated_decay
  ENSMUST00000162530 Luc7l2-013 38559215-38569565 retained_intron
  ENSMUST00000162718 Luc7l2-009 38551531-38557918 processed_transcript
  ENSMUST00000163012 Luc7l2-011 38551531-38554007 processed_transcript
  ENSMUST00000163047 Luc7l2-004 38551334-38605040 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057692ENSMUST00000159936ENSMUST00000160430ENSMUST00000160511ENSMUST00000161227ENSMUST00000161538ENSMUST00000162718ENSMUST00000163047
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057692 N/A N/A N/A N/A 3.423±0.98 N/A N/A N/A 1.983±0.00 N/A 14.843±2.28 5.847±0.00 N/A N/A
ENSMUST00000159936 N/A N/A N/A N/A 2.849±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160430 10.648±2.21 N/A 11.446±1.10 17.142±5.49 7.098±2.32 10.826±3.01 5.788±0.82 5.536±1.16 8.239±3.15 14.282±2.09 8.403±1.73 18.851±7.26 15.307±0.00 3.625±0.21
ENSMUST00000160511 N/A N/A N/A N/A N/A N/A N/A N/A 9.699±2.56 N/A N/A 29.857±0.00 19.242±2.77 8.640±4.27
ENSMUST00000161227 7.709±1.24 N/A 30.652±0.17 22.490±5.43 3.258±0.00 5.017±0.00 5.272±0.00 5.433±0.66 19.339±11.18 9.944±1.13 15.978±0.00 46.008±13.29 25.055±8.27 16.966±12.12
ENSMUST00000161538 3.439±0.00 6.547±0.04 N/A N/A N/A N/A 3.442±0.46 2.656±0.13 11.832±6.26 N/A 13.328±1.57 N/A 12.643±0.14 N/A
ENSMUST00000162718 N/A N/A N/A N/A 4.082±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163047 N/A N/A N/A 36.012±0.00 N/A N/A N/A N/A N/A N/A N/A 52.969±0.00 31.209±1.94 13.764±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030D CIL_00030D_0002 CGP 6:38533502-38609470
CIL_00030E CIL_00030E_0002 CGP 6:38551334-38637239

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003729 IEA mRNA binding
GO:0005685 IEA U1 snRNP
GO:0006376 IEA mRNA splice site selection

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019765 C7orf55-LUC7L2 readthrough protein_coding Danio_rerio
ENSG00000146963 C7orf55-LUC7L2 C7orf55-LUC7L2 readthrough protein_coding Homo_sapiens
ENSG00000269955 LUC7L2 LUC7-like 2 (S. cerevisiae) protein_coding Homo_sapiens

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