C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LUC7-like 2 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161227 Luc7l2-002 ENSMUSG00000029823 10090 + 6:38551803-38609427 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161227
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161227 7.709±1.24 30.652±0.17 22.490±5.43 3.258±0.00 5.017±0.00 5.272±0.00 5.433±0.66 19.339±11.18 9.944±1.13 15.978±0.00 46.008±13.29 25.055±8.27 16.966±12.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030D CIL_00030D_0002 CGP 6:38533502-38609470
CIL_00030E CIL_00030E_0002 CGP 6:38551334-38637239

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003729 IEA mRNA binding
GO:0005685 IEA U1 snRNP
GO:0006376 IEA mRNA splice site selection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263545 C7orf55-LUC7L2-201 protein_coding Homo_sapiens 0 2124
ENST00000354926 C7orf55-LUC7L2-001 protein_coding Homo_sapiens 0 2124
ENST00000456182 C7orf55-LUC7L2-003 nonsense_mediated_decay Homo_sapiens 0 2087
ENST00000463912 C7orf55-LUC7L2-004 retained_intron Homo_sapiens 0 1088
ENST00000482860 C7orf55-LUC7L2-007 processed_transcript Homo_sapiens 0 1002
ENST00000498518 C7orf55-LUC7L2-006 retained_intron Homo_sapiens 0 2085
ENST00000541170 C7orf55-LUC7L2-005 protein_coding Homo_sapiens 0 1784
ENST00000541515 LUC7L2-001 protein_coding Homo_sapiens 0 1834
ENST00000619796 C7orf55-LUC7L2-202 protein_coding Homo_sapiens 0 2126

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