C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 13 (sodium/sulfate symporters), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031868 Slc13a4-001 ENSMUSG00000029843 10090 - 6:35267957-35308131 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031868
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031868 0.451±0.00 0.544±0.30 1.203±0.44 0.469±0.13 0.045±0.03 0.136±0.03 0.513±0.17 0.041±0.01 2.150±0.34 0.037±0.02 0.212±0.14 38.152±31.88 0.468±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082N CIL_00082N_0002 VISTA 6:35053329-35655339
CIL_0002H3 CIL_0002H3_0002 CGP 6:35267957-35326141

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005215 IEA transporter activity
GO:0005575 ND cellular_component
GO:0006814 IEA sodium ion transport
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354042 SLC13A4-001 protein_coding Homo_sapiens 0 2036
ENST00000422968 C7orf73-002 processed_transcript Homo_sapiens 2e-33 148
ENST00000471405 SLC13A4-002 retained_intron Homo_sapiens 0 1447

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