C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin 210
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142951 Nup210-007 ENSMUSG00000030091 10090 - 6:91013070-91055384 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000142951
Transcript ID Bladder Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000142951 0.207±0.00 1.992±0.00 1.482±0.25 0.821±0.00 1.999±1.33 0.993±0.23 4.220±1.51 0.188±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051B CIL_00051B_0002 CGP 6:90659598-91116829
CIL_000518 CIL_000518_0002 CGP 6:91013068-91174692

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005635 IDA nuclear envelope
GO:0005643 ISO nuclear pore

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254508 NUP210-001 protein_coding Homo_sapiens 0 2695
ENST00000357061 NUP210P1-002 processed_transcript Homo_sapiens 1e-26 124
ENST00000420141 NUP210-002 retained_intron Homo_sapiens 0 420
ENST00000479519 NUP210-003 retained_intron Homo_sapiens 0 420
ENST00000485755 NUP210-004 processed_transcript Homo_sapiens 4e-34 148
ENST00000504322 NUP210P1-001 transcribed_processed_pseudogene Homo_sapiens 0 289
ENST00000514993 NUP210P1-003 processed_transcript Homo_sapiens 3e-25 119

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