C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: xeroderma pigmentosum, complementation group C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030094 Xpc 10090 - 6:91489305-91515884 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032182 Xpc-001 91489305-91515884 protein_coding
  ENSMUST00000150279 Xpc-002 91492273-91515884 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032182ENSMUST00000150279
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032182 7.087±0.69 3.135±0.15 7.618±1.30 6.130±0.61 4.355±0.93 3.491±1.19 2.376±0.70 9.937±0.41 2.936±0.29 9.713±1.02 3.321±0.48 9.170±2.71 7.667±2.68 1.835±0.14
ENSMUST00000150279 N/A 0.521±0.06 N/A N/A 0.865±0.00 N/A N/A N/A N/A N/A N/A 1.019±0.00 N/A 0.254±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GU CIL_0007GU_0002 CGP 6:91489305-91522625

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000715 IEA nucleotide-excision repair, DNA damage recognition
GO:0003697 IEA single-stranded DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006281 IMP DNA repair
GO:0006289 IDA nucleotide-excision repair
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0010224 IMP response to UV-B
GO:0031573 IGI intra-S DNA damage checkpoint
GO:0042493 IEA response to drug
GO:0070062 IEA extracellular vesicular exosome
GO:0071942 ISS XPC complex
GO:1901990 IEA regulation of mitotic cell cycle phase transition

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039754 xpc xeroderma pigmentosum, complementation group C protein_coding Danio_rerio
ENSG00000154767 XPC xeroderma pigmentosum, complementation group C protein_coding Homo_sapiens

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