C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: xeroderma pigmentosum, complementation group C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150279 Xpc-002 ENSMUSG00000030094 10090 - 6:91492273-91515884 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastOvaryTestisENSMUST00000150279
Transcript ID Adrenal Breast Ovary Testis
ENSMUST00000150279 0.521±0.06 0.865±0.00 1.019±0.00 0.254±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GU CIL_0007GU_0002 CGP 6:91489305-91522625

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285021 XPC-001 protein_coding Homo_sapiens 0 1295
ENST00000427795 XPC-006 retained_intron Homo_sapiens 0 364
ENST00000476581 XPC-002 nonsense_mediated_decay Homo_sapiens 0 1114

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