C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: plexin D1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030123 Plxnd1 10090 - 6:115954811-115995005 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015511 Plxnd1-001 115954811-115995005 protein_coding
  ENSMUST00000123165 Plxnd1-003 115955800-115956364 processed_transcript
  ENSMUST00000131590 Plxnd1-002 115966963-115969426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015511
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015511 54.326±6.33 88.186±8.29 8.948±0.04 13.441±5.54 44.082±18.36 15.032±0.85 25.406±3.75 20.637±1.87 5.248±0.93 64.306±8.56 7.074±0.68 62.116±22.05 18.763±10.34 1.736±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000314 CIL_000314_0002 CGP 6:115944938-115995005
CIL_000315 CIL_000315_0002 CGP 6:115954811-116193486

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001569 IMP patterning of blood vessels
GO:0003151 IMP outflow tract morphogenesis
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005886 IC plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0007416 IMP synapse assembly
GO:0017154 IPI semaphorin receptor activity
GO:0019904 IEA protein domain specific binding
GO:0030027 IEA lamellipodium
GO:0030334 IMP regulation of cell migration
GO:0032092 IDA positive regulation of protein binding
GO:0043542 IMP endothelial cell migration
GO:0045765 IMP regulation of angiogenesis
GO:0060666 IDA dichotomous subdivision of terminal units involved in salivary gland branching
GO:0071526 IGI semaphorin-plexin signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089935 PLXND1 (2 of 2) plexin D1 protein_coding Danio_rerio
ENSG00000004399 PLXND1 plexin D1 protein_coding Homo_sapiens

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